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Extract from the Register of European Patents

EP About this file: EP1842147

EP1842147 - METHOD FOR MODELING CELL SIGNALING SYSTEMS BY MEANS OF BAYESIAN NETWORKS [Right-click to bookmark this link]
Status	The application has been refused Status updated on 10.02.2012 Database last updated on 17.05.2024
Most recent event Tooltip	10.02.2012	Refusal of application	published on 14.03.2012 [2012/11]
Applicant(s)	For all designated states The Board of Trustees of the Leland Stanford Junior University Office of Technology Licensing 1705 El Camino Real Palo Alto, CA 94306-1106 / US
	For all designated states Massachusetts Institute of Technology 77 Massachusetts Avenue Cambridge, MA 02139-4307 / US
	[N/P]
Former [2008/30]	For all designated states THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY Office of Technology Licensing 1705 El Camino Real Palo Alto, CA 94306-1106 / US
	For all designated states Massachusetts Institute of Technology 77 Massachusetts Avenue Cambridge, MA 02139-4307 / US
Former [2007/41]	For all designated states THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY Office of Technology Licensing 1705 El Camino Real Palo Alto, CA 94306-1106 / US
	For all designated states THE MASSACHUSETTS INSTITUTE OF TECHNOLOGY 77 Massachusetts Avenue Bldg. 16-244 Cambridge, MA 02139-4307 / US
Inventor(s)	01 / NOLAN, Garry P. 248 Upper Terrace San Francisco, CA 94117 / US
	02 / PEREZ, Omar D. 269 Campus Drive CCSR 3220 Palo Alto, California 94305-5175 / US
	03 / SACHS, Karen 77 Massachusetts Avenue 32-G536 Cambridge, Massachusetts 02139 / US
	04 / LAUFFENBURGER, Douglas Alan MIT Biological Engineering Bldg. 56, Room 341 Cambridge, Massachusetts 02139 / US
	[2008/33]
Former [2008/31]	01 / NOLAN, Garry P. 248 Upper Terrace San Francisco, CA 94117 / US
	02 / PEREZ, Omar D. 269 Campus Drive CCSR 3220 Palo Alto, California 94305-5175 / US
	03 / SACHS, Karen 77 Massachusetts Avenue 32-G536 Cambridge, Massachusetts 02139 / US
	04 / LAUFFENBURGER, Douglas Alan MIT Biological Engineering Bldg. 56, Room 341 Cambridge, Massachusetts 02139 / US
Former [2008/30]	01 / NOLAN, Garry P. 248 Upper Terrace San Francisco, CA 94117 / US
	02 / PEREZ, Omar D. 269 Campus Drive CCSR 3220 Palo Alto, California 94305-5175 / US
	03 / SACHS, Karen 77 Massachusetts Avenue 32-G536 Cambridge, Massachusetts 02139 / US
	04 / LAUFFENBURGER, Douglas Alan MIT Biological Engineering Bldg. 56, Room 341 Cambridge, Massachusetts 02139 / US
Former [2007/41]	01 / NOLAN, Garry P. 269 Campus Drive Ccsr 3220 Palo A lto, California 94305-5175 / US
	02 / PEREZ, Omar D. 269 Campus Drive Ccsr 3220 Palo Al to, California 94305-5175 / US
	03 / SACHS, Karen 77 Massachusetts Avenue 32-G536 Cambridge, Massachusetts 02139 / US
	04 / LAUFFENBURGER, Douglas MIT, Biological Engineering Bldg. 56, Room 341 Cambridge, Massachusetts 02139 / US
Representative(s)	Brasnett, Adrian Hugh, et al Mewburn Ellis LLP City Tower 40 Basinghall Street London EC2V 5DE / GB
	[N/P]
Former [2007/41]	Brasnett, Adrian Hugh, et al Mewburn Ellis LLP York House 23 Kingsway London WC2B 6HP / GB
Application number, filing date	06719440.7	24.01.2006
	[2007/41]
	WO2006US02583
Priority number, date	US20050646757P	24.01.2005 Original published format: US 646757 P
	[2007/41]
Filing language	EN
Procedural language	EN
Publication	Type:	A2 Application without search report
	No.:	WO2006079092
	Date:	27.07.2006
	Language:	EN
	[2006/30]
	Type:	A2 Application without search report
	No.:	EP1842147
	Date:	10.10.2007
	Language:	EN
	The application published by WIPO in one of the EPO official languages on 27.07.2006 takes the place of the publication of the European patent application.
	[2007/41]
Search report(s)	International search report - published on:	EP	07.12.2006
Classification	IPC:	G06F19/00	[2007/41]
	CPC:	G01N33/5023 (EP,US); G01N33/5091 (EP,US); G01N33/6803 (EP,US); G16B5/00 (EP,US); G16B5/20 (EP,US)
Designated contracting states	AT, BE, BG, CH, CY, CZ, DE, DK, EE, ES, FI, FR, GB, GR, HU, IE, IS, IT, LI, LT, LU, LV, MC, NL, PL, PT, RO, SE, SI, SK, TR [2007/41]
Extension states	AL	Not yet paid
	BA	Not yet paid
	HR	Not yet paid
	MK	Not yet paid
	YU	Not yet paid
Title	German:	VERFAHREN ZUR MODELLIERUNG VON ZELLSIGNALISIERUNGSSYSTEMEN MITHILFE VON BAYES-NETZWERKEN	[2007/41]
	English:	METHOD FOR MODELING CELL SIGNALING SYSTEMS BY MEANS OF BAYESIAN NETWORKS	[2007/41]
	French:	UTILISATION DE RESEAUX DE BAYES AFIN DE MODELISER DES SYSTEMES DE SIGNALISATION DES CELLULES	[2007/41]
Entry into regional phase	20.07.2007	National basic fee paid
	20.07.2007	Designation fee(s) paid
	20.07.2007	Examination fee paid
Examination procedure	20.07.2007	Examination requested [2007/41]
	10.10.2007	Amendment by applicant (claims and/or description)
	04.11.2008	Despatch of a communication from the examining division (Time limit: M04)
	09.03.2009	Reply to a communication from the examining division
	27.10.2009	Despatch of a communication from the examining division (Time limit: M06)
	10.06.2010	Despatch of communication that the application is deemed to be withdrawn, reason: reply to the communication from the examining division not received in time
	16.08.2010	Reply to a communication from the examining division
	20.10.2011	Cancellation of oral proceeding that was planned for 05.12.2011
	25.10.2011	Despatch of communication that the application is refused, reason: substantive examination [2012/11]
	04.11.2011	Application refused, date of legal effect [2012/11]
	05.12.2011	Date of oral proceedings (cancelled)
Divisional application(s)	The date of the Examining Division's first communication in respect of the earliest application for which a communication has been issued is 04.11.2008
Request for further processing for:	The application is deemed to be withdrawn due to failure to reply to the examination report
	16.08.2010	Request for further processing filed
	16.08.2010	Full payment received (date of receipt of payment)
Fees paid	Renewal fee
	14.01.2008	Renewal fee patent year 03
	26.01.2009	Renewal fee patent year 04
	13.01.2010	Renewal fee patent year 05
	29.12.2010	Renewal fee patent year 06
Opt-out from the exclusive Tooltip competence of the Unified Patent Court	See the Register of the Unified Patent Court for opt-out data
	Responsibility for the accuracy, completeness or quality of the data displayed under the link provided lies entirely with the Unified Patent Court.
Cited in	International search	[Y]WO03067210 (UNIV LELAND STANFORD JUNIOR [US], et al) [Y] 1-12 * page 32, line 15 - line 33; claims 1,2 *;
		[Y] - SACHS K; PEREZ O D; PE'ER D; NOLAN C P; GIFFORD D K; JAAKKOLA T S; LAUFFENBURGER D A, "Analysis of signaling pathways in human T-cells using Bayesian network modeling of single cell data", PROCEEDINGS. 2004 IEEE COMPUTATIONAL SYSTEMS BIOINFORMATICS CONFERENCE, Los Alamitos, CA, USA, (200408), page 644, XP009072679 [Y] 1-12 * column 1 *
		[DY] - PE'ER ET AL, "Inferring subnetworks from perturbed expression profiles", BIOINFORMATICS, OXFORD UNIVERSITY PRESS, OXFORD,, GB, (200106), vol. 17, no. SUPPL 1, ISSN 1367-4803, pages S215 - S224, XP002963503 [DY] 1-12 * page S216 - page S217 *
		[YD] - PEREZ O D ET AL, "Simultaneous measurement of multiple active kinase states using polychromatic flow cytometry", NATURE BIOTECHNOLOGY, NATURE PUBLISHING GROUP, NEW YORK, NY, US, (200202), vol. 20, ISSN 1087-0156, pages 155 - 162, XP002386690 [YD] 1-12 * abstract * * page 155, column 2 * * page 160, column 2 * * figures 2,4 *
		[PX] - SACHS KAREN; PEREZ OMAR; PE'ER DANA; LAUFFENBURGER DOUGLAS A; NOLAN GARRY P, "Causal protein-signaling networks derived from multiparameter single-cell data.", SCIENCE, (20050422), vol. 308, no. 5721, pages 523 - 529, XP007901146 [PX] 1-12 * page 524, column 3 - page 525, column 1 * * figure 1 * DOI: http://dx.doi.org/10.1126/science.1105809
		[DA] - SACHS KAREN; GIFFORD DAVID; JAAKKOLA TOMMI; SORGER PETER; LAUFFENBURGER DOUGLAS A, "Bayesian network approach to cell signaling pathway modeling", SCIENCE'S STKE, (20020903), vol. 2002, no. 148, page PE38, XP007901148 [DA] 1-12 * page 1, column 1 - column 2 *
		[AD] - FRIEDMAN NIR, "Inferring cellular networks using probabilistic graphical models", SCIENCE, (20040206), vol. 303, no. 5659, pages 799 - 805, XP007901147 [AD] 1-12 * page 800, column 2 - column 3 * * page 803, column 1 *

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