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Extract from the Register of European Patents

EP About this file: EP2740026

EP2740026 - METHODS AND SYSTEMS FOR BIOLOGICAL DATA ANALYSIS [Right-click to bookmark this link]
StatusThe application has been refused
Status updated on  09.10.2020
Database last updated on 03.06.2024
FormerExamination is in progress
Status updated on  23.11.2018
Most recent event   Tooltip09.10.2020Refusal of applicationpublished on 11.11.2020  [2020/46]
Applicant(s)For all designated states
QIAGEN Redwood City, Inc.
1001 Marshall Street, Suite 200
Redwood City, California 94063 / US
[2017/50]
Former [2014/24]For all designated states
Ingenuity Systems, Inc.
1700 Seaport Boulevard
3rd Floor
Redwood City, CA 94063 / US
Inventor(s)01 / LAURANCE, Megan, E.
1367 South Van Ness Avenue
San Francisco, CA 94110 / US
 [2014/24]
Representative(s)Vossius & Partner Patentanwälte Rechtsanwälte mbB
Siebertstrasse 3
81675 München / DE
[N/P]
Former [2014/24]Vossius & Partner
Siebertstrasse 4
81675 München / DE
Application number, filing date12820124.102.08.2012
WO2012US49391
Priority number, dateUS201161574539P03.08.2011         Original published format: US 201161574539 P
[2014/24]
Filing languageEN
Procedural languageEN
PublicationType: A1 Application with search report
No.:WO2013019987
Date:07.02.2013
Language:EN
[2013/06]
Type: A1 Application with search report 
No.:EP2740026
Date:11.06.2014
Language:EN
The application published by WIPO in one of the EPO official languages on 07.02.2013 takes the place of the publication of the European patent application.
[2014/24]
Search report(s)International search report - published on:US07.02.2013
(Supplementary) European search report - dispatched on:EP26.05.2015
ClassificationIPC:G06F19/26, G06F19/28
[2015/10]
CPC:
G16B45/00 (EP,US); G06F3/04817 (EP,US); G06F3/04842 (US);
G16B50/00 (EP,US); G16B50/10 (EP,US); G16B50/30 (EP,US)
Former IPC [2014/24]G06F7/00
Designated contracting statesAL,   AT,   BE,   BG,   CH,   CY,   CZ,   DE,   DK,   EE,   ES,   FI,   FR,   GB,   GR,   HR,   HU,   IE,   IS,   IT,   LI,   LT,   LU,   LV,   MC,   MK,   MT,   NL,   NO,   PL,   PT,   RO,   RS,   SE,   SI,   SK,   SM,   TR [2014/24]
TitleGerman:VERFAHREN UND SYSTEME ZUR BIOLOGISCHEN DATENANALYSE[2014/24]
English:METHODS AND SYSTEMS FOR BIOLOGICAL DATA ANALYSIS[2014/24]
French:PROCÉDÉS ET SYSTÈMES D'ANALYSE DE DONNÉES BIOLOGIQUES[2014/24]
Entry into regional phase27.02.2014National basic fee paid 
27.02.2014Search fee paid 
27.02.2014Designation fee(s) paid 
27.02.2014Examination fee paid 
Examination procedure27.02.2014Examination requested  [2014/24]
22.12.2015Amendment by applicant (claims and/or description)
26.11.2018Despatch of a communication from the examining division (Time limit: M04)
04.04.2019Reply to a communication from the examining division
08.06.2020Cancellation of oral proceeding that was planned for 23.06.2020
23.06.2020Date of oral proceedings (cancelled)
26.06.2020Despatch of communication that the application is refused, reason: substantive examination [2020/46]
06.07.2020Application refused, date of legal effect [2020/46]
Divisional application(s)EP20194599.5
The date of the Examining Division's first communication in respect of the earliest application for which a communication has been issued is  26.11.2018
Fees paidRenewal fee
25.08.2014Renewal fee patent year 03
20.08.2015Renewal fee patent year 04
22.08.2016Renewal fee patent year 05
22.08.2017Renewal fee patent year 06
28.08.2018Renewal fee patent year 07
26.08.2019Renewal fee patent year 08
20.08.2020Renewal fee patent year 09
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Responsibility for the accuracy, completeness or quality of the data displayed under the link provided lies entirely with the Unified Patent Court.
Documents cited:Search[XA]US2004126840  (CHENG JILL [US], et al) [X] 1-24,32 * abstract * * paragraph [0089] - paragraph [0097] * * paragraph [0119] * * paragraph [0133] - paragraph [0135] * * paragraph [0151] - paragraph [0212] * * figures 13-16 * [A] 25-31;
 [XA]US2004241730  (YAKHINI ZOHAR [IL], et al) [X] 1-24,32 * abstract * * paragraph [0018] - paragraph [0032] * * paragraph [0077] - paragraph [0100] * * paragraph [0157] - paragraph [0186] * * figures 3-10 * [A] 25-31;
 [IA]US2006036368  (CHEN RICHARD O [US], et al) [I] 30,31 * abstract * * paragraph [0018] - paragraph [0023] * * paragraph [0045] - paragraph [0057] * * paragraph [0065] - paragraph [0072] * * paragraph [0081] - paragraph [0095] *[A] 1-29,32;
 [IA]US2007198653  (JARNAGIN KURT [US], et al) [I] 25-29 * abstract * * paragraph [0005] - paragraph [0012] * * paragraph [0064] - paragraph [0072] * * paragraph [0098] - paragraph [0099] * [A] 1-24,30-32;
 [XA]  - MELISSA S CLINE ET AL, "Integration of biological networks and gene expression data using Cytoscape", NATURE PROTOCOLS, (20071001), vol. 2, no. 10, doi:10.1038/nprot.2007.324, ISSN 1754-2189, pages 2366 - 2382, XP055163055 [X] 1-24,32 * abstract * * page 2367, column l - page 2375, column l * * page 2378, paragraph 4 * * figures 1,4,7 * [A] 25-31

DOI:   http://dx.doi.org/10.1038/nprot.2007.324
 [A]  - Darryl Gietzen ET AL, "Ingenuity Pathways Analysis (IPA) Of Large Datasets", (20101022), URL: http://www.usc.edu/hsc/nml/assets/bioinfo/IPA/Data Analysis training Handouts.pdf, (20150119), XP055163033 [A] 1-32 * page 4 - page 8 * * page 14 - page 15 *
 [A]  - LEX A ET AL, "Caleydo: Design and evaluation of a visual analysis framework for gene expression data in its biological context", PACIFIC VISUALIZATION SYMPOSIUM (PACIFICVIS), 2010 IEEE, IEEE, PISCATAWAY, NJ, USA, (20100302), ISBN 978-1-4244-6685-6, pages 57 - 64, XP031647755 [A] 1-32 * page 58, column l, paragraph 4 - page 61, column r, paragraph 1 *
International search[X]US2003220820  (SEARS CHRISTOPHER P [US], et al);
 [A]US2004061702  (KINCAID ROBERT [US]);
 [A]US2006036425  (LE COCQ CHRISTIAN A [US], et al);
 [Y]US2010185984  (WRIGHT WILLIAM [CA], et al)
The EPO accepts no responsibility for the accuracy of data originating from other authorities; in particular, it does not guarantee that it is complete, up to date or fit for specific purposes.