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Extract from the Register of European Patents

EP About this file: EP3485044

EP3485044 - SYSTEMS AND METHODS TO FACILITATE GENETIC RESEARCH [Right-click to bookmark this link]
StatusThe application is deemed to be withdrawn
Status updated on  11.12.2020
Database last updated on 06.07.2024
FormerRequest for examination was made
Status updated on  19.04.2019
FormerThe international publication has been made
Status updated on  20.01.2018
Most recent event   Tooltip11.12.2020Application deemed to be withdrawnpublished on 13.01.2021  [2021/02]
Applicant(s)For all designated states
Pacific Northwest Diabetes Research Institute
720 Broadway
Seattle, Washington 98122 / US
[2019/21]
Inventor(s)01 / DUDLEY, Aimee M.
720 Broadway
Seattle Washington 98122 / US
02 / CROMIE, Gareth
720 Broadway
Seattle Washington 98122 / US
03 / SIRR, Amy
720 Broadway
Seattle Washington 98122 / US
04 / SAKHANENKO, Nikita
720 Broadway
Seattle Washington 98122 / US
 [2019/21]
Representative(s)Hobson, David James, et al
Mathys & Squire The Shard
32 London Bridge Street
London SE1 9SG / GB
[N/P]
Former [2019/21]Hobson, David James, et al
Mathys & Squire LLP The Shard
32 London Bridge Street
London SE1 9SG / GB
Application number, filing date17828589.614.07.2017
[2019/21]
WO2017US42265
Priority number, dateUS201662362708P15.07.2016         Original published format: US 201662362708 P
[2019/21]
Filing languageEN
Procedural languageEN
PublicationType: A1 Application with search report
No.:WO2018014002
Date:18.01.2018
Language:EN
[2018/03]
Type: A1 Application with search report 
No.:EP3485044
Date:22.05.2019
Language:EN
The application published by WIPO in one of the EPO official languages on 18.01.2018 takes the place of the publication of the European patent application.
[2019/21]
Search report(s)International search report - published on:US18.01.2018
(Supplementary) European search report - dispatched on:EP03.01.2020
ClassificationIPC:C12Q1/6869, C12Q1/6806, G16B20/00, G16B20/40
[2020/04]
CPC:
C12Q1/6806 (EP,US); C12Q1/6869 (EP,US); G01N1/30 (US);
G01N15/14 (US); G01N15/1434 (US); G16B20/00 (EP);
G16B20/40 (EP,US); G16Z99/00 (EP,US); G01N15/149 (US);
G01N2001/302 (US) (-)
C-Set:
C12Q1/6869, C12Q2535/122, C12Q2537/165 (EP,US)
Former IPC [2019/21]C12Q1/68, C12N15/81, C12Q1/06
Designated contracting statesAL,   AT,   BE,   BG,   CH,   CY,   CZ,   DE,   DK,   EE,   ES,   FI,   FR,   GB,   GR,   HR,   HU,   IE,   IS,   IT,   LI,   LT,   LU,   LV,   MC,   MK,   MT,   NL,   NO,   PL,   PT,   RO,   RS,   SE,   SI,   SK,   SM,   TR [2019/21]
TitleGerman:SYSTEME UND VERFAHREN ZUR ERMÖGLICHUNG DER GENETISCHEN FORSCHUNG[2019/21]
English:SYSTEMS AND METHODS TO FACILITATE GENETIC RESEARCH[2019/21]
French:SYSTÈMES ET PROCÉDÉS DESTINÉS À FACILITER LA RECHERCHE GÉNÉTIQUE[2019/21]
Entry into regional phase14.02.2019National basic fee paid 
14.02.2019Search fee paid 
14.02.2019Designation fee(s) paid 
14.02.2019Examination fee paid 
Examination procedure14.02.2019Amendment by applicant (claims and/or description)
14.02.2019Examination requested  [2019/21]
01.08.2020Application deemed to be withdrawn, date of legal effect  [2021/02]
21.08.2020Despatch of communication that the application is deemed to be withdrawn, reason: reply to the communication from the examining division not received in time  [2021/02]
Fees paidRenewal fee
29.07.2019Renewal fee patent year 03
Penalty fee
Additional fee for renewal fee
31.07.202004   M06   Not yet paid
Opt-out from the exclusive  Tooltip
competence of the Unified
Patent Court		 See the Register of the Unified Patent Court for opt-out data
Responsibility for the accuracy, completeness or quality of the data displayed under the link provided lies entirely with the Unified Patent Court.
Documents cited:Search[Y]WO2014059370  (INST SYSTEMS BIOLOGY [US], et al) [Y] 1-15 * para. 6, 7, 24, 25, 31; fig. 1 *;
 [Y]  - Attfield Paul V. and Bell Philip J.L., "Genetics and classical genetic manipulations of industrial yeasts", Attfield Paul V. and Bell Philip J.L., J H De Winde ET AL, Functional Genetics of Industrial Yeasts, Springer, (20030101), pages 17 - 55, ISBN 978-3-540-37003-1, XP009517679 [Y] 1-15 * fig. 2; para. bridging p. 32-33 *

DOI:   http://dx.doi.org/10.1007%2F3-540-37003-X_2
 [AD]  - NIKITA A. SAKHANENKO ET AL, "Biological Data Analysis as an Information Theory Problem: Multivariable Dependence Measures and the Shadows Algorithm", JOURNAL OF COMPUTATIONAL BIOLOGY., US, (20151101), vol. 22, no. 11, doi:10.1089/cmb.2015.0051, ISSN 1066-5277, pages 1005 - 1024, XP055455517 [AD] 1-15 * the whole document *

DOI:   http://dx.doi.org/10.1089/cmb.2015.0051
 [A]  - GARETH A. CROMIE ET AL, "Genomic Sequence Diversity and Population Structure of Saccharomyces cerevisiae Assessed by RAD-seq", G3, GENES|GENOMES|GENETICS, (20131011), vol. 3, no. 12, doi:10.1534/g3.113.007492, pages 2163 - 2171, XP055652400 [A] 1-15 * the whole document *

DOI:   http://dx.doi.org/10.1534/g3.113.007492
 [A]  - DAVID J. GALAS ET AL, "Describing the Complexity of Systems: Multivariable "Set Complexity" and the Information Basis of Systems Biology", JOURNAL OF COMPUTATIONAL BIOLOGY., US, (20140201), vol. 21, no. 2, doi:10.1089/cmb.2013.0039, ISSN 1066-5277, pages 118 - 140, XP055652403 [A] 1-15 * the whole document *

DOI:   http://dx.doi.org/10.1089/cmb.2013.0039
 [A]  - PAUL M. MAGWENE ET AL, "The Statistics of Bulk Segregant Analysis Using Next Generation Sequencing", PLOS COMPUTATIONAL BIOLOGY, (20111103), vol. 7, no. 11, doi:10.1371/journal.pcbi.1002255, page e1002255, XP055652407 [A] 1-15 * the whole document *

DOI:   http://dx.doi.org/10.1371/journal.pcbi.1002255
International search[Y]US2012164677  (FLEMING JAMES E [US], et al) [Y] 1-19 * Abstract; para [0042]; para [0091] *;
 [Y]WO2014059370  (INST SYSTEMS BIOLOGY [US], et al) [Y] 1-19 * Abstract; para [0006-0007]; para [0013]; para [0017]; para [0021]; para [0024-0026]; para [0042-0043]; para [0051] *;
 [Y]  - SAKHANENKO et al., "Biological Data Analysis as an Information Theory Problem: Multivariable Dependence Measures and the Shadows Algorithm", JOURNAL OF COMPUTATIONAL BIOLOGY, (20150000), vol. 22, no. 11, pages 1005 - 1024, XP055455517 [Y] 16, 18-19 - * . p1006, last para; p1007, para 4; p1009, para 4, 6; p1019, para 2; Supplementary Material, p1, para 1, Supplementary Material, p1019, para 2, Supplemental Figs. S3-S5 *

DOI:   http://dx.doi.org/10.1089/cmb.2015.0051
 [Y]  - IGNAC et al., "Discovering Pair-Wise Genetic Interactions: An Information Theory-Based Approach", PLoS ONE, (20140326), vol. 9, no. 3, pages 1 - 14, XP055455524 [Y] 17 * , pg 1 col 1 para 1, pg 3, col 2 para 3, pg 9 col 2 para 1 *

DOI:   http://dx.doi.org/10.1371/journal.pone.0092310
 [A]  - Anonymous, "BD LSRFortessa X-20 Cell Analyzer", (20171030), pages 1 - 2, bdbiosciences, URL: https://www.bdbiosciences.com/documents/lsr_fortessax20_filter_guide.pdf, XP055592347 [A] 7 * whole doc. *
The EPO accepts no responsibility for the accuracy of data originating from other authorities; in particular, it does not guarantee that it is complete, up to date or fit for specific purposes.