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Extract from the Register of European Patents

EP About this file: EP3639173

EP3639173 - ALIGNMENT FREE FILTERING FOR IDENTIFYING FUSIONS [Right-click to bookmark this link]
StatusExamination is in progress
Status updated on  11.05.2023
Database last updated on 02.11.2024
FormerRequest for examination was made
Status updated on  20.03.2020
FormerThe international publication has been made
Status updated on  22.12.2018
Formerunknown
Status updated on  17.07.2018
Most recent event   Tooltip26.07.2024Change - applicantpublished on 28.08.2024  [2024/35]
Applicant(s)For all designated states
Grail, Inc.
1525 O'Brien Drive
Menlo Park, California 94025 / US
[2024/35]
Former [2022/02]For all designated states
Grail, LLC
1525 O'Brien Drive
Menlo Park, CA 94025 / US
Former [2020/17]For all designated states
Grail, Inc.
1525 O'Brien Drive
Menlo Park, California 94025 / US
Inventor(s)01 / SCOTT, Eric Michael
Grail Inc.
1525 O'Brien Drive
Menlo Park CA 94025 / US
02 / SINGH, Pranav Parmjit
Grail Inc.
1525 O'Brien Drive
Menlo Park CA 94025 / US
03 / DESAI, Mohini Jangi
Grail Inc.
1525 O'Brien Drive
Menlo Park CA 94025 / US
04 / YANG, Xiao
Grail Inc.
1525 O'Brien Drive
Menlo Park CA 94025 / US
05 / KIM, Hyunsung John
Grail Inc.
1525 O'Brien Drive
Menlo Park CA 94025 / US
06 / PAN, Wenying
Grail Inc.
1525 O'Brien Drive
Menlo Park CA 94025 / US
07 / LARSON, Matthew H.
Grail Inc.
1525 O'Brien Drive
Menlo Park CA 94025 / US
 [2020/17]
Representative(s)Murgitroyd & Company
165-169 Scotland Street
Glasgow G5 8PL / GB
[N/P]
Former [2020/17]Murgitroyd & Company
Murgitroyd House
165-169 Scotland Street
Glasgow G5 8PL / GB
Application number, filing date18737463.212.06.2018
[2020/17]
WO2018US37148
Priority number, dateUS201762518510P12.06.2017         Original published format: US 201762518510 P
[2020/17]
Filing languageEN
Procedural languageEN
PublicationType: A1 Application with search report
No.:WO2018231860
Date:20.12.2018
Language:EN
[2018/51]
Type: A1 Application with search report 
No.:EP3639173
Date:22.04.2020
Language:EN
The application published by WIPO in one of the EPO official languages on 20.12.2018 takes the place of the publication of the European patent application.
[2020/17]
Search report(s)International search report - published on:EP20.12.2018
ClassificationIPC:G06F19/22
[2020/17]
CPC:
G16B30/10 (EP,US); C12Q1/6874 (US); G16B10/00 (US);
G16B15/00 (US); G16B20/00 (US); G16B25/00 (US);
G16B30/00 (US); G16B30/20 (US); G16B35/00 (US);
G16B35/10 (US); G16B35/20 (US); G16B40/00 (US);
G16B45/00 (US); G16B5/00 (US); G16B50/00 (US);
G16H50/20 (US); G16H50/30 (US); C12Q1/6869 (EP);
C12Q1/6886 (EP); C12Q2600/112 (US); C12Q2600/118 (US);
C12Q2600/156 (US); C12Q2600/158 (US); C12Q2600/16 (US) (-)
Designated contracting statesAL,   AT,   BE,   BG,   CH,   CY,   CZ,   DE,   DK,   EE,   ES,   FI,   FR,   GB,   GR,   HR,   HU,   IE,   IS,   IT,   LI,   LT,   LU,   LV,   MC,   MK,   MT,   NL,   NO,   PL,   PT,   RO,   RS,   SE,   SI,   SK,   SM,   TR [2020/17]
TitleGerman:AUSRICHTFREIE FILTERUNG ZUR IDENTIFIZIERUNG VON FUSIONEN[2020/17]
English:ALIGNMENT FREE FILTERING FOR IDENTIFYING FUSIONS[2020/17]
French:FILTRAGE SANS ALIGNEMENT DESTINÉ À L'IDENTIFICATION DE FUSIONS[2020/17]
Entry into regional phase09.01.2020National basic fee paid 
09.01.2020Designation fee(s) paid 
09.01.2020Examination fee paid 
Examination procedure09.01.2020Amendment by applicant (claims and/or description)
09.01.2020Examination requested  [2020/17]
09.01.2020Date on which the examining division has become responsible
10.05.2023Despatch of a communication from the examining division (Time limit: M06)
17.11.2023Reply to a communication from the examining division
Fees paidRenewal fee
09.01.2020Renewal fee patent year 03
14.06.2021Renewal fee patent year 04
31.03.2022Renewal fee patent year 05
31.03.2023Renewal fee patent year 06
17.05.2024Renewal fee patent year 07
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Cited inInternational search[I]  - YOU LI ET AL, "ChimeRScope: a novel alignment-free algorithm for fusion transcript prediction using paired-end RNA-Seq data", NUCLEIC ACIDS RESEARCH, (20170502), vol. 45, no. 13, doi:10.1093/nar/gkx315, ISSN 0305-1048, pages e120 - e120, XP055504228 [I] 1-26 * abstract * * p. 2, right-hand column, ll. 57 to 59; p.3, left-hand column, ll. 1 to 3; p. 3, right-hand column, ll. 3 to 6; p. 3, left-hand column, ll. 5 to 11; p. 3, left-hand column, ll. 11 to 13; p. 3, left-hand column, l. 18 to right-hand column l. 2; p. 4, left-hand column, ll. 15 to 18; p. 4, right-hand column, ll. 5 to 11; p. 4, right-hand column, ll. 30 to 51 * * figures 2,3 *

DOI:   http://dx.doi.org/10.1093/nar/gkx315
 [A]  - DIOGO PRATAS ET AL, "An alignment-free method to find and visualise rearrangements between pairs of DNA sequences", SCIENTIFIC REPORTS, (20150518), vol. 5, no. 1, doi:10.1038/srep10203, XP055504273 [A] 1-26 * the whole document *

DOI:   http://dx.doi.org/10.1038/srep10203
 [A]  - GILLIAN HSIEH ET AL, "Statistical algorithms improve accuracy of gene fusion detection", NUCLEIC ACIDS RESEARCH, (20170524), vol. 45, no. 13, doi:10.1093/nar/gkx453, ISSN 0305-1048, pages e126 - e126, XP055504277 [A] 1-26 * the whole document *

DOI:   http://dx.doi.org/10.1093/nar/gkx453
 [A]  - AARON M. NEWMAN ET AL, "FACTERA: a practical method for the discovery of genomic rearrangements at breakpoint resolution", BIOINFORMATICS., GB, (20140820), vol. 30, no. 23, doi:10.1093/bioinformatics/btu549, ISSN 1367-4803, pages 3390 - 3393, XP055459046 [A] 1-26 * the whole document *

DOI:   http://dx.doi.org/10.1093/bioinformatics/btu549
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