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Extract from the Register of European Patents

EP About this file: EP3896697

EP3896697 - METHOD AND DEVICE FOR IDENTIFYING MHC CLASS I-PRESENTED PEPTIDES FROM FRAGMENT ION MASS SPECTRA [Right-click to bookmark this link]
StatusThe application is deemed to be withdrawn
Status updated on  26.08.2022
Database last updated on 02.11.2024
FormerThe application has been published
Status updated on  17.09.2021
Most recent event   Tooltip26.08.2022Application deemed to be withdrawnpublished on 28.09.2022  [2022/39]
Applicant(s)For all designated states
Julius-Maximilians-Universität Würzburg
Sanderring 2
97070 Würzburg / DE
[2021/42]
Inventor(s)01 / Schilling, Bastian
Kühlenbergstr. 17
97078 Würzburg / DE
02 / Schlosser, Andreas
Dr.-Georg-Teichtweier-Str. 4
97076 Würzburg / DE
03 / Erhard, Florian
Rottendorfer Str. 2b
97073 Würzburg / DE
 [2021/42]
Representative(s)Lucke, Andreas
Boehmert & Boehmert
Anwaltspartnerschaft mbB
Pettenkoferstrasse 22
80336 München / DE
[2021/42]
Application number, filing date20170185.117.04.2020
[2021/42]
Filing languageEN
Procedural languageEN
PublicationType: A1 Application with search report 
No.:EP3896697
Date:20.10.2021
Language:EN
[2021/42]
Search report(s)(Supplementary) European search report - dispatched on:EP02.10.2020
ClassificationIPC:G16B20/30
[2021/42]
CPC:
G16B20/30 (EP)
Designated contracting statesAL,   AT,   BE,   BG,   CH,   CY,   CZ,   DE,   DK,   EE,   ES,   FI,   FR,   GB,   GR,   HR,   HU,   IE,   IS,   IT,   LI,   LT,   LU,   LV,   MC,   MK,   MT,   NL,   NO,   PL,   PT,   RO,   RS,   SE,   SI,   SK,   SM,   TR [2021/42]
Extension statesBANot yet paid
MENot yet paid
Validation statesKHNot yet paid
MANot yet paid
MDNot yet paid
TNNot yet paid
TitleGerman:VERFAHREN UND VORRICHTUNG ZUR IDENTIFIZIERUNG VON MHC-KLASSE I-PRÄSENTIERTEN PEPTIDEN AUS FRAGMENT-IONEN-MASSENSPEKTREN[2021/42]
English:METHOD AND DEVICE FOR IDENTIFYING MHC CLASS I-PRESENTED PEPTIDES FROM FRAGMENT ION MASS SPECTRA[2021/42]
French:PROCÉDÉ ET DISPOSITIF POUR IDENTIFIER DES PEPTIDES PRÉSENTÉS PAR MHC DE CLASSE I À PARTIR DE SPECTRES DE MASSE D'IONS FRAGMENTAIRES[2021/42]
Examination procedure21.04.2022Application deemed to be withdrawn, date of legal effect  [2022/39]
13.05.2022Despatch of communication that the application is deemed to be withdrawn, reason: examination fee not paid in time  [2022/39]
Fees paidPenalty fee
Additional fee for renewal fee
30.04.202203   M06   Not yet paid
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Documents cited:Search[Y]WO2019173687  (UNIV INDIANA TRUSTEES [US]) [Y] 1-13 * whole document, in particular paragraphs [0019] and [0048]. *;
 [YD]  - CÉLINE M. LAUMONT ET AL, "Global proteogenomic analysis of human MHC class I-associated peptides derived from non-canonical reading frames", NATURE COMMUNICATIONS, (20160105), vol. 7, no. 1, doi:10.1038/ncomms10238, XP055695586 [YD] 1-13 * Whole document, in particular abstract; Figure 1; first paragraph of Results on page 2; paragraph "Generation of the control and all-frames databases" on page 10; paragraph "Identification of cryptic and conventional MAPs" on page 10; paragraph bridging left and right column on page 10 *

DOI:   http://dx.doi.org/10.1038/ncomms10238
 [Y]  - LI SUJUN ET AL, ConstrainedDe NovoSequencing of neo-Epitope Peptides Using Tandem Mass Spectrometry, BIG DATA ANALYTICS IN THE SOCIAL AND UBIQUITOUS CONTEXT : 5TH INTERNATIONAL WORKSHOP ON MODELING SOCIAL MEDIA, MSM 2014, 5TH INTERNATIONAL WORKSHOP ON MINING UBIQUITOUS AND SOCIAL ENVIRONMENTS, MUSE 2014 AND FIRST INTERNATIONAL WORKSHOP ON MACHINE LE, (20180418), ISBN 978-3-642-17318-9, XP047472162 [Y] 1-13 * whole document, in particular page 141, beginning of second full paragraph; page 146, beginning of first full paragraph; page 150, paragraph 2; paragraph "false discovery rate estimation" on pages 145-146; Figures *

DOI:   http://dx.doi.org/10.1007/978-3-319-89929-9_9
 [AD]  - THILO MUTH ET AL, "A Potential Golden Age to Come-Current Tools, Recent Use Cases, and Future Avenues for De Novo Sequencing in Proteomics", PROTEOMICS, DE, (20180822), vol. 18, no. 18, doi:10.1002/pmic.201700150, ISSN 1615-9853, page 1700150, XP055732553 [AD] 1-13 * the whole document *

DOI:   http://dx.doi.org/10.1002/pmic.201700150
by applicant   - BASSANI-STERNBERG MBRAUNLEIN EKLAR RENGLEITNER TSINITCYN PAUDEHM S et al., "Direct identification of clinically relevant neoepitopes presented on native human melanoma tissue by mass spectrometry", Nat Commun, (20160000), vol. 7, doi:10.1038/ncomms13404, page 13404, XP055533501

DOI:   http://dx.doi.org/10.1038/ncomms13404
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