Extract from the Register of European Patents

EP Citations: EP4226378

Cited inInternational search
Type:Non-patent literature
Publication information:[XI]  - MARCEL MARTIN, "Cutadapt removes adapter sequences from high-throughput sequencing reads", EMBNET.JOURNAL, (20110802), vol. 17, doi:10.14806/ej.17.1.200, ISSN 1023-4152, page 10, XP055737194 [X] 1,15,29,36-38 * section "Algorithm"; section "Features" * [I] 1-38
DOI: http://dx.doi.org/10.14806/ej.17.1.200
Type:Non-patent literature
Publication information:[X]  - Anonymous, "Babraham Bioinformatics - Trim Galore!", (20200925), URL: https://web.archive.org/web/20200925233805/https://www.bioinformatics.babraham.ac.uk/projects/trim_galore/, (20220124), XP055882969 [X] 1,15,29,36-38 * p. 1/6 to 2/6, bullet points reciting features *
Type:Non-patent literature
Publication information:[X]  - STINUS LINDGREEN, "AdapterRemoval: easy cleaning of next-generation sequencing reads", BMC RESEARCH NOTES, BIOMED CENTRAL LTD, GB, (20120702), vol. 5, no. 1, doi:10.1186/1756-0500-5-337, ISSN 1756-0500, page 337, XP021129876 [X] 1,15,29,36-38 * p. 4 of 7, left-hand column, last par.: "[...] one or two FASTQ files [...]";; figure 1; table 1 *
DOI: http://dx.doi.org/10.1186/1756-0500-5-337
Type:Non-patent literature
Publication information:[I]  - T. MAGOC ET AL, "FLASH: fast length adjustment of short reads to improve genome assemblies", BIOINFORMATICS, GB, (20110907), vol. 27, no. 21, doi:10.1093/bioinformatics/btr507, ISSN 1367-4803, pages 2957 - 2963, XP055332486 [I] 15 * abstract * * figure 4 *
DOI: http://dx.doi.org/10.1093/bioinformatics/btr507
Type:Non-patent literature
Publication information:[A]  - TOM SMITH ET AL, "UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy", GENOME RESEARCH, US, (20170118), vol. 27, no. 3, doi:10.1101/gr.209601.116, ISSN 1088-9051, pages 491 - 499, XP055517852 [A] 1-38 * the whole document *
DOI: http://dx.doi.org/10.1101/gr.209601.116
Type:Non-patent literature
Publication information:[A]  - Ben Langmead ET AL, "Fast gapped-read alignment with Bowtie 2", Nature Methods, Vol.9 NO.4 | APRIL 2012, Nature Methods, doi:10.1038/nmeth.1923, (20120101), pages 357 - 360, URL: http://www.webpages.uidaho.edu/msettles/courses/bcb504Sp12/reading/nmeth.1923.pdf, (20130708), XP055070044 [A] 1-38 * the whole document *
DOI: http://dx.doi.org/10.1038/nmeth.1923
Cited inby applicant
Type:Patent literature
Publication No.:US2019249248